Hp XC System 4.x Software Instrukcja Użytkownika Strona 5
- Strona / 135
- Spis treści
- BOOKMARKI
Oceniono. / 5. Na podstawie oceny klientów
5.2 Submitting a Serial Job Using LSF...................................................................................................49
5.2.1 Submitting a Serial Job with the LSF bsub Command............................................................49
5.2.2 Submitting a Serial Job Through SLURM Only......................................................................50
5.3 Submitting a Parallel Job.................................................................................................................51
5.3.1 Submitting a Non-MPI Parallel Job.........................................................................................51
5.3.2 Submitting a Parallel Job That Uses the HP-MPI Message Passing Interface.........................52
5.3.3 Submitting a Parallel Job Using the SLURM External Scheduler...........................................53
5.4 Submitting a Batch Job or Job Script...............................................................................................56
5.5 Submitting Multiple MPI Jobs Across the Same Set of Nodes........................................................58
5.5.1 Using a Script to Submit Multiple Jobs...................................................................................58
5.5.2 Using a Makefile to Submit Multiple Jobs..............................................................................58
5.6 Submitting a Job from a Host Other Than an HP XC Host.............................................................61
5.7 Running Preexecution Programs....................................................................................................61
6 Debugging Applications.............................................................................................63
6.1 Debugging Serial Applications.......................................................................................................63
6.2 Debugging Parallel Applications....................................................................................................63
6.2.1 Debugging with TotalView.....................................................................................................64
6.2.1.1 SSH and TotalView..........................................................................................................64
6.2.1.2 Setting Up TotalView......................................................................................................64
6.2.1.3 Using TotalView with SLURM........................................................................................65
6.2.1.4 Using TotalView with LSF...............................................................................................65
6.2.1.5 Setting TotalView Preferences.........................................................................................65
6.2.1.6 Debugging an Application..............................................................................................66
6.2.1.7 Debugging Running Applications..................................................................................67
6.2.1.8 Exiting TotalView............................................................................................................67
7 Monitoring Node Activity............................................................................................69
7.1 The Xtools Utilities..........................................................................................................................69
7.2 Running Performance Health Tests.................................................................................................70
8 Tuning Applications.....................................................................................................75
8.1 Using the Intel Trace Collector and Intel Trace Analyzer...............................................................75
8.1.1 Building a Program — Intel Trace Collector and HP-MPI......................................................75
8.1.2 Running a Program – Intel Trace Collector and HP-MPI.......................................................76
8.2 The Intel Trace Collector and Analyzer with HP-MPI on HP XC...................................................77
8.2.1 Installation Kit.........................................................................................................................77
8.2.2 HP-MPI and the Intel Trace Collector.....................................................................................77
8.3 Visualizing Data – Intel Trace Analyzer and HP-MPI....................................................................79
9 Using SLURM................................................................................................................81
9.1 Introduction to SLURM...................................................................................................................81
9.2 SLURM Utilities...............................................................................................................................81
9.3 Launching Jobs with the srun Command.......................................................................................81
9.3.1 The srun Roles and Modes......................................................................................................82
9.3.1.1 The srun Roles.................................................................................................................82
9.3.1.2 The srun Modes...............................................................................................................82
9.3.2 Using the srun Command with HP-MPI................................................................................82
9.3.3 Using the srun Command with LSF........................................................................................82
9.4 Monitoring Jobs with the squeue Command..................................................................................82
9.5 Terminating Jobs with the scancel Command.................................................................................83
9.6 Getting System Information with the sinfo Command...................................................................83
Table of Contents 5
- HP XC System Software 1
- XC User Guide 1
- Table of Contents 3
- 4 Table of Contents 4
- Table of Contents 5 5
- 6 Table of Contents 6
- Table of Contents 7 7
- List of Figures 8
- List of Tables 9
- List of Examples 10
- About This Document 11
- Related Information 13
- Linux Web Sites 15
- Manpages 16
- HP Encourages Your Comments 17
- 1.1 System Architecture 19
- 1.1.4 Node Specialization 20
- 1.1.5 Storage and I/O 21
- 1.1.6 File System 21
- File System Layout 22
- 1.3 User Environment 23
- 1.3.3 Commands 24
- 1.4.1 Parallel Applications 24
- 1.5 Run-Time Environment 25
- 1.5.5 HP-MPI 26
- 2 Using the System 29
- 2.2.1 Introduction 30
- 2.2.5 Launching Jobs 31
- 2.2.8 Resuming Suspended Jobs 31
- 32 Using the System 32
- 3.1 Overview of Modules 33
- 3.2 Supplied Modulefiles 34
- 3.6 Loading a Modulefile 36
- 3.7 Unloading a Modulefile 37
- 3.9 Modulefile Conflicts 37
- 3.10 Creating a Modulefile 38
- 4 Developing Applications 39
- 4.2 Compilers 40
- 4.4 Interrupting a Job 41
- 4.5 Setting Debugging Options 41
- 42 Developing Applications 42
- 4.7.1.1 Modulefiles 43
- 4.7.1.2 HP-MPI 43
- 4.7.1.3 OpenMP 43
- 4.7.1.4 Pthreads 43
- 4.7.1.5 Quadrics SHMEM 43
- 44 Developing Applications 44
- $ module load mpi 45
- 4.8 Developing Libraries 46
- 4.8 Developing Libraries 47 47
- 48 Developing Applications 48
- 5 Submitting Jobs 49
- 50 Submitting Jobs 50
- 5.3 Submitting a Parallel Job 51
- 52 Submitting Jobs 52
- 56 Submitting Jobs 56
- 58 Submitting Jobs 58
- 60 Submitting Jobs 60
- -R "type=SLINUX64" 61
- 6 Debugging Applications 63
- 6.2.1.1 SSH and TotalView 64
- 6.2.1.2 Setting Up TotalView 64
- 66 Debugging Applications 66
- 6.2.1.8 Exiting TotalView 67
- 7 Monitoring Node Activity 69
- 70 Monitoring Node Activity 70
- 72 Monitoring Node Activity 72
- 8 Tuning Applications 75
- 76 Tuning Applications 76
- 8.2.1 Installation Kit 77
- Running a Program 78
- 9 Using SLURM 81
- 9.3.1.1 The srun Roles 82
- 9.3.1.2 The srun Modes 82
- 9.7 Job Accounting 84
- 9.8 Fault Tolerance 84
- 9.9 Security 84
- 10 Using LSF 85
- $ squeue --jobs $SLURM_JOBID 86
- 10.4 Job Terminology 89
- 90 Using LSF 90
- 10.6 Submitting Jobs 91
- DescriptionExit Code 92
- Success0 92
- 92 Using LSF 92
- SLURM_JOBID=53 93
- SLURM_NPROCS=4 93
- $ sinfo -p lsf -lNe 96
- 96 Using LSF 96
- $ bjobs 24 98
- 98 Using LSF 98
- 102 Using LSF 102
- $ unset SLURM_JOBID 103
- $ unset SLURM_NPROCS 103
- $ srun --jobid=250 uptime 103
- 11 Advanced Topics 107
- 108 Advanced Topics 108
- 110 Advanced Topics 110
- 11.3.1 Example Procedure 1 111
- 11.3.2 Example Procedure 2 111
- 11.3.3 Example Procedure 3 112
- 11.5.1 Shared File View 113
- 11.5.2 Private File View 113
- % srun -A options 114
- % ./wrapper 114
- % bsub -I options... wrapper 114
- A Examples 115
- Submit the job: 116
- View the job: 116
- 118 Examples 118
- Exit from the shell: 119
- Show the environment: 119
- Display the script: 119
- Run the job: 120
- Show the job allocation: 120
- Show the SLURM job ID: 121
- Exit the pseudo-terminal: 121
- View the interactive jobs: 121
- View the finished jobs: 121
- View the node state: 122
- View the running job: 122
- View the finished job: 123
- Glossary 125
- 126 Glossary 126
- 128 Glossary 128
- 130 Glossary 130
- 132 Index 132
- 134 Index 134
Powiązane produkty i podręczniki dla Oprogramowanie Hp XC System 4.x Software
(51 strony)© 2020, manymanuals.pl. Wszelkie prawa zastrzeżone. | 0.068 s |
Manymanuals.com
Manymanuals.de
Manymanuals.fr
Manymanuals.it
Manymanuals.pl
Manymanuals.cz
Manymanuals.es
Manymanuals-pt.com
Komentarze do niniejszej Instrukcji